Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLDYLRISIGSLNEKNFHVIYTNKKYHLIAEDLQNISTIDQTSLYVKDIIKRVLLIGSTSIVISHNHSSGNTQPSSRIYPSLGS
1IM5 Chain:A ((4-57))
----------------EALIVVDMQRDFMPGGALPVPEGDKIIPKVNEYIRKFKEKGALIVATRDWHPENHISFRERGGPWPRH
General information:
TITO was launched using:
RESULT:
Template:
1IM5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7503 for 275 contacts (-27.3/contact) +
2D Compatibility (PS) -5957 + (NN) -2542 + (LL) 1040
1D Compatibility (HY) 0 + (ID) 300
Total energy: -15262.0 ( -55.50 by residue)
QMean score : 0.280
(partial model without unconserved sides chains):
PDB file :
Tito_1IM5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IM5-query.scw
PDB file :
Tito_Scwrl_1IM5.pdb
: