Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSILLTRPLSD----SLNTRSTLKKYGYKVYIEPAFTIKHLQPD-----I-SAYKFDVVISTSKNSVKAFSQI--C-------------RVDDLPIITVGNSTMQTAKDSGFSDIISADSNVEGLISFVKNYYSRAVKFLYIRGQEVSCDLKKRLSEEGFNVREVILYKTIIKRGLTNRCKNLL-LGGRINSVAFFSSQTARIFCSLVLKSGLSNVMDNITAYAMSKNIVDSLKPIKWKKIITSRLPTQENLIDIINKDC |
| 1JR2 Chain:A ((1-258)) | -MKVLLLKDAKEDDCGQDPYIRELGLYGLEATLIPVLSFEFLSLPSFSEKLSHPEDYGGLIFTSPRAVEAAELCLEQNNKTEVWERSLKEKWNAKSVYVVGNATASLVSKIGLDTEGETCGNAEKLAEYICSRESSALPLLFPCGNLKREILPKALKDKGIAMESITVYQTVAHPGIQGNLNSYYSQQGVPASITFFSPSGLTYSLKHIQELSGD-NIDQIKFAAIGPTTARALAAQGLPVSCTAESPTPQALATGIRKAL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1JR2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -135152 for 1814 contacts (-74.5/contact) +
2D Compatibility (PS) -24872 + (NN) -3990 + (LL) 128
1D Compatibility (HY) -7200 + (ID) 2300
Total energy: -173386.0 ( -95.58 by residue)
QMean score : 0.574
|
|
|