Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVKLTTKIASLKLFASYAIATYILVMLTSALNLFKGYVADTFYIAETLLIILTIILIIILTTEQTWKHHDLWRRIVEVLLLLMALTGNVFTLLMFVS-IRRYQRTSQIHSYNGWE----SFIRKTTRHRIAIIGLLILVYMLTLSIVSQFTFDTTLATKNQFNALLHGPSLAYPFGTDDFGRDLFTRVVVGTKLTFSISIISVVIAVIFGVLLGTIAGYFNHIDNLIMRILDVVFAIPSLLLAVAIIASFGASIPNLIIALSIGNIPSFARTMRASVLEIKRMEYVDAARITGENTWNIIWRYILPNAIAPMIVRF----SLNIGVVVLT--TSSLSFLGLGVAPDVAEWGNILRTGSNYLETHSNLAIVPGVCI--MFVVLAFNFIGDAVRDALDPRIH---- |
| 4NTC Chain:A ((2-326)) | -MSIGKLLSNGALLVDVLIIGAGPAGLSTATGLARQL----------------------------------------------------HTAVVFDSGVYRNAKTQHMHNVLGWDHRNPAELRAAGRADLTTRYSTIQFQNSTIEAIRQVETNQLFEARDNEGHSWYGRKVVLATGVRDIPLD-----IEGYSECWANGIYHCLFC----------DGYEERGQETVGVLALGPIANPARALHLARMAL---RLSESVTIYTNGN-EQLAKEIQQAAEE----SPVGASGLKFEA--RPIRRFEKGDVAKTVIVHLGESESKTEGFLVYNPQTEVNGPFAKQLALNMTEGGDILTTPPFY-ETSVPGVFAVGDCATPLKAVTPAVSMGSLAAGGLVAQLQAQAL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NTC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -347170 for 2618 contacts (-132.6/contact) +
2D Compatibility (PS) -31987 + (NN) 1840 + (LL) 9572
1D Compatibility (HY) -2400 + (ID) 3000
Total energy: -373145.0 ( -142.53 by residue)
QMean score : 0.188
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