Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPKATTPYQQYQHIADVKDADVAIDFSNPNLLFPLLDEEFHLPLVVATTGEKEKLLNKLDELSQNMPVFFSANMSYGVHALTKILAAAVPLLDDFDIELTEAHHNKKVDAPSGTLEKLYDVIVSLKENVTPVYDRHELNEKRQPQDIGIHSIRGGTIVGEHEVLFAGTDETIQITHRAQSKDIFANGAIQAAERLVNKPNGFYTFDNL
3QY9 Chain:B ((4-243))
MKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPKATTPYQQYQHIADVKGADVAIDFSNPNLLFPLLDEDFHLPLVVATTGEKEKLLNKLDELSQNMPVFFSANMSYGVHALTKILAAAVPLLDDFDIELTEAHHNKKVDAPSGTLEKLYDVIVSLKENVTPVYDRHELNEKRQPQDIGIHSIRGGTIVGEHEVLFAGTDETIQITHRAQSKDIFANGAIQAAERLVNKPNGFYTFDNL
General information:
TITO was launched using:
RESULT:
Template:
3QY9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -153318 for 1857 contacts (-82.6/contact) +
2D Compatibility (PS) -25806 + (NN) -12650 + (LL) 0
1D Compatibility (HY) -32400 + (ID) 11900
Total energy: -236074.0 ( -127.13 by residue)
QMean score : 0.659
(partial model without unconserved sides chains):
PDB file :
Tito_3QY9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QY9-query.scw
PDB file :
Tito_Scwrl_3QY9.pdb
: