Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQQNKRLITISMLSAIAFVLTFIKFPIPFLPPYLTLDFSDVPSLLATFTFGPVAGIVVALVKNLLNYLFSMGDPVGPFANFLAGASFLLTAYAIYKNKRSTKSLITGLIIATIVMTIVLSILNYFVLLPLYGMIFNLADIANNLKVIIVSGIIPFNIIKGIVISIVFILLYRRLANFLKRI
1BH9 Chain:A ((1-45))
----------------------------------------------------------LFSKELRCMMYGFGDDQNPYTESVDILEDLVIEFITEMTHKAMSI------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1BH9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20903 for 219 contacts (-95.4/contact) +
2D Compatibility (PS) -4845 + (NN) -5594 + (LL) 13276
1D Compatibility (HY) -1600 + (ID) 300
Total energy: -19966.0 ( -91.17 by residue)
QMean score : 0.422
(partial model without unconserved sides chains):
PDB file :
Tito_1BH9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BH9-query.scw
PDB file :
Tito_Scwrl_1BH9.pdb
: