Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------------------------------------------------------------------------------------------MQFEMRKIAFNAPKAFSLEHEGVVLEGEIVRVGAKLFRLKARLKGELMLICDTSGKEFKKSLDE-SLVLHISDGLWDTQSQSLDFDNLDVIESFNGFIDLSEILRSEVESIKLDYHYAD---------------------------------------------------------------------------- |
| 1YDN Chain:A ((2-284)) | AEHVEIVEMAARDGLQNEKRFVPTADKIALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRADGVRYSVLVPNMKGYEAAAAAHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSLGC----HEVSLGDTIGRGTPDTVAAMLDAVL-----------------------------------AIAPAHSLAGHYHDTGGRALDNIRVSLEKGLRVFDASVGGLGGCPFAPGAKGNVDTVAVVEMLHEMGFETGLDLDRLRSAGLFTQALRQD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YDN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22141 for 515 contacts (-43.0/contact) +
2D Compatibility (PS) -8059 + (NN) -826 + (LL) 2108
1D Compatibility (HY) 400 + (ID) 700
Total energy: -29218.0 ( -56.73 by residue)
QMean score : 0.517
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