Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRSWMKKKYFTLLLQSSVVLAVFIGCSSTRNHTFSALSNQENTDDKLPVVHSIKTINDVSSVGFEWSKVADTYDIDGFVLYRLKKDSKLKRIATIKNPYATHYYDE-GLETESSYTYQLATYKGDKISKLSEPILVKT---SFINPVESVFASLE--YPKSVKVFWSPHPN--PSVSKYIIQRQN-KDGKFLNVGAV-KNRLFVEFFDKDLEDGQKYRYQIIAENFMGD--KSRPSVIVEGKTK-DLPKE-IANVRVS----QNLTRQIELSWDKSP----EEDVIAYRIYASNNRNDKYKFIAQTTNTSYVDKIEKDNLTRYYKVVAVDKTHLEGALPKEPAMGETSDRPEAPIITKGTIQDSSALIQWENNPSPKIATYAVYRFEANSK-----TPLRFGNITQNQFVDKDMKVGVAYRYQVVSVDKDGLESHPSKEVRLFLER |
| 3L5H Chain:A ((102-481)) | -------------------------------------------PPEKPKNLSCIVN-EGKKMRCEWDGGRETHLETNFTLKSEWATHKFADCKAKRD-TPTSCTVDYSTVYFVNIEVWVEAENALGKVT-SDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRPSKAPSFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHL-QNY-TVNATKLTV-N-LTNDRYLATLTVRNLVGKSD-AAVLTIPACDFQATHPVMDLKAFPKDNMLWVEWTTPR-ESVKKYILEWCVLSDKAPCITDWQQEDGTVHRTYLRGNLAESKCYLITVTPVYADGPGSPESIKAYLKQAP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3L5H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14093 for 2361 contacts (-6.0/contact) +
2D Compatibility (PS) -37873 + (NN) -7381 + (LL) 3920
1D Compatibility (HY) 2400 + (ID) 2400
Total energy: -55427.0 ( -23.48 by residue)
QMean score : 0.273
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