Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKDFLEDYKKSVLERKSEGIPPLPLNAKQVEAVVEILMKDPTNAAFAKELLIHRVSPGVDEGAKVKAEFLAQLSQKKLECPHISALEATTLLGTMLGGYNVEPLIVGLESQDKNIAKESAKALKTTLLVYGSFDKIAAMSKTNALAKEVLESWANAEWFLNKEPLNECIEACVFKIDGETNTDDLSPASDAFTRSDIPLHAKAMLKNRIENYEQRIEAIKTKGVPVAYVGDVVGTGSSRKSATNSIMWHFGKDIPFVPNKRSGGIVIGGVIAPIFFATCEDSGALPIVADVKDLKEGDIIKIYPYKGEITLNDKVVSTFKLEPETLLDEVRASGRIPLIIGRGLTNKARKFLGLGESEAFKKPSAPKSDAKGYTLAQKIVGHACGV---KGILPGA-YCEPKVTTVGSQDTTGAMTRDEVKELAS-LKFDAPFVLQSFCHTAAYPKP------SDV----SLHATLPGFITQRGGVALHPGDGVIHTWLNR-MGLPDTLGTGGDSHTRFPLG---ISFPAGSGLVAFAAVTGTMPLNMPESVLVRFKGEMNPGITLRDLVNAIPYYAIKKGLLTVEKKGKINVFNGRILEIE--GLPDIKMEQAFELSDASAERSAAACVVRLNKEPMIEYLKSNIKLIDEMIASGYEDKETLKKRRDAMQAWVDKPVLLEPDSNAQYAAVIEIDVAEITEPILACPNDPDDVATLSEVLADTTG-KRPHAIDEVFIGSCMTN-IGHFRAFGEIVK-----NAPPSQARLWVVPPSKMDEQELINEGYYAIFGAAGARTEVPGCSLCMGNQA---R-VRDNAVVFSTSTRNFDNRMGR--GAKVYLGSAELGAACALLGRIPTKEEYMNLVSEKLESQKDKIYRYMNFNLMENFRL |
| 1C96 Chain:A ((30-482)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RLNRPLTLSEKIVYGHLDDPANQEIERGKTYLRLRPDRVAMQDATAQMAMLQFISSGLPKVAVPSTI--HCDHLIEAQLGGEKDLRRAKDINQEVYNFLATAGAKYGVGFWRPGSGIIHQIILENYAYPGVLLIGTDSHTPNGGGLGGICIGVGGADAVDVMAGIPWELKCPKVIGVKLTGSLSGWTSPKDVILKV----AGIL--------TVKGGTGAIVEYHGPGVDSISCTGMATICNMGAEIGATTSVFPYNHRM-KKYLSKT----------GRADIANL------ADEF---KDHLVPDPGCHYDQVIEINLSEL-KPHINGPFTPDLAHPVAEVGSVAEKEGWPLDIRVGLIGSCTNSSYEDMGRSAAVAKQALAHGLKC-KSQFTITPGSEQIRATIERDGYAQVLRDVGGIVLANACGPCIGQWDRKDIKKGEKNTIVTSYNRNFTGRNDANPETHAFVTSPEIVTALAIAGTLKFNPETDFLTGKDGKKFKLEAPDADELPRAEFDPG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1C96.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -172109 for 3930 contacts (-43.8/contact) +
2D Compatibility (PS) -45283 + (NN) -23456 + (LL) 27176
1D Compatibility (HY) -13200 + (ID) 4550
Total energy: -231422.0 ( -58.89 by residue)
QMean score : 0.427
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