Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKGSLAIVLGSLLASGTFYTALADGMPMKQQHNNMGESVELHFHYPIKGKQEPKNNHLVVLIDPKIEANKVIPENYQKEFEKSLFLQLSNFLERKGYSVSQFKDVSEIP-QDIKEKALLVLRMDGNVAILEDIVEESDALSEE---KVIDMSSGYLNLNFVEPKSEDIIHSFGIDVSKIKAVIERVELRRTNSGGFVPKTFVHRIKETDHDRAIKKIMNQAYHKVMAHITKELSKKHMERYEKVSSEMKKRK |
4YH8 Chain:A ((15-194)) | KVNCSFYYKIG----------ACRHGERCSRKHVK------------------PNFSQTILC--PNMYKNPIHEPNGKKFTQRELAEQFDAFYEDMFCEFSKYGEVEQLVVCDNVGDHLV-----GNVYVRFKYEESAQNAIDDLNSRWYSQRPVYAELSPVT--------------DFREACCRQHETSECQRGGLC--NFMHA----------------------KKPSPQLLRDLVLAQRKYLALNAAEE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YH8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21728 for 1260 contacts (-17.2/contact) +
2D Compatibility (PS) -17602 + (NN) 2574 + (LL) 5104
1D Compatibility (HY) -6400 + (ID) 1650
Total energy: -39702.0 ( -31.51 by residue)
QMean score : 0.287
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