Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAIKKSELYSSLWAGADSLRG-GMDASEYKNYVLNLLFLKYISDKAKNNMDSEIEVPQGCFYEDILALEGDKEIGDKLNKIIAKIA-ERN-DLKGVIDSVDFNDNTKLGEGKAMIDTLSNLVKIFADLSLGAHGALDDDLLGDAYEYLMRHFASESGKSKGQFYTPSEVSLLLSLLLGIDENTRQDKSIYDPTCGSGSLLLKASSLAGKK----------------GLTIYGQEKDISTTALCKMNMILHNSAT-----ADIAKGGSSTLSNPLFTTENGMLKTFDYVVANPPFSLKNWTDGLSIDPKSKQVINDSFNRFEDGTPPEKNGDFAFLLHIIKSLNPTGKGAVILPHGVLFRGNAEAQIRKNLLMKGYIKGVIGLAPNLFYGTSIPACVIVLDKENAH-------ARKGVFVIDASKDFKKDGNKNRLREQDVQKMIDTFNALK------------EIPYYSKMVSLEEISLNDYNLNIPRYIAAKQELEKDLFALINSPSYLPKNEIKAYDPYFQVFKELKNTLFKKSDKEGYYALKTECENIKDLITQSLEYQTFHASVLSAFESLDLFTTFNDLEPGFNPKTLIESVCSKVLKEFEKVGILDKYGVYQLFKDYYNEVLQDDWFLISFNGFRSAKELRKLTPLKDKNKKANYLEEPDFIVQKTYYKSDLIPKHLIKQRFFEKETKELEELENALNEKEALLDEFIEEHSNEEGLFDGLKINESVLKKELKNATDLEDKQILKTALEWLEAKNKALKMKNKAYEELELKAFHQYKNLEINEIKDLIIKDKWLNSLKNALENKIQKRTNAFASALNEIISSYSNSLLELDKEVKESESKVLEHLKDLGLMG |
| 2AR0 Chain:A ((6-456)) | -----NDLVAKLWKLCDNLRDGGVSYQNYVNELASLLFLKMCKETGQ----EAEYLPEGYRWDDLKSR-IGQEQLQFYRKMLVHLGEDDKKLVQAVFHNVSTTI--------TEPKQITALVSNMDSLDW-------------------------------QYFTPRPLIKTIIHLLKP----QPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRLG--NTLGSDGE-----NLPKAHIVATNPPFGSA-AGTN-------------ITRTF---VHPTSNKQLCFMQHIIETLHPGGRAAVVVPDNVLFEGGKGTDIRRDLMDKCHLHTILRLPTGIFYAQGVKTNVLFFTKGTVANPNQDKNCTDDVWVYDLRTNMPSFGKRTPFTDEHLQPFERVYGEDPHGLSPRTEGEWSFNAEETEVADSEENKNTDQHLATSRWRKFSREWIRTAKSDSLDISWLKDKDPEPDVLAAEAMGELVQALSELDALMRELGASDEADLQRQLLEEAFGGV-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2AR0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -125554 for 2980 contacts (-42.1/contact) +
2D Compatibility (PS) -40206 + (NN) -20112 + (LL) 24204
1D Compatibility (HY) -21200 + (ID) 4450
Total energy: -187318.0 ( -62.86 by residue)
QMean score : 0.433
|
|
|