Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYVEQLNEQMVIKRDGRKASFDLIKIRNAVEASMKAINLEDETFLEEILLEVVSELPNKADMTIDEIQHCVENTLMKSTYPDVARAYIEYRHDRDHERENITDMHKSVEKLLQKDKTVVNENANKDATVFNTQRDLTAGAVAKSYALKYMLPKHVSNAHLKGEIHFHDLDYSPYHAMTNCCLIDIEGMLSKGFTIGNANVESPKSIQTATAQIAQIIANVASSQ-YGGCSVDRIDEVLSVYARLNFEKHKKDAMEWVVPEKQEGYAAEKTRKDIYDAMQSLEYEINTLY--TSNG-------QTPFVTLGFGLGEDWFA----REIQKAILKVRIGGVGKDKHTAIFPKLVFSIRRGTNLNAEDPNYDIKQLALECSSK-RMYPDVLNYDSLVRL-----T-GD---FKVPMGCRSFLPAWENENGEHVNAGRNNLGVVTLNIPRIAIQSGG--------------------DKERFWE----IFHERMKTVKDALLFRLNRVRQARPENAPILYKYGAFGKR-LQDGEDV-DQLFNKERSTISIGYIGLYEAATVFYGGEW------------------------------------EGD--KEAKNFTLDIVKELKAYADNWKDEYGYWFSVYSTPSESLTDRFNRLDKEKYGVIK------DITDKDYYQNSFHYDVRKKIDFEKD-YPEFCSGGFIHYCEYPKMV-H---NTKALEAVWDYSYD-RVAYLGTNTPIDKCYECDFEGEFVPTEEGFKCPSCGNTDPEKADVVKRTCGYLGNPMKRPMVHGRHVEISNRVKHMENLGE |
| 1R9D Chain:A ((251-786)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KVSGEGAKSFYEACQLFWFIHAIINIESNGHSISPARFDQYMYPYYENDK---------------------NITDKFAQELIDCIWIKLNDINKVRDEISTKHFGGYPMYQNLIVGGQNS-EGKDATNKVSYMALEAAVHV------KLPQPSLSVRIWNK---TP----DEFLLRAAELTREGLGLPAYYNDEVIIPALVSRGLTLEDARDYGIIGCVEPQKP---------GKTEGWHDSAFFNLARIVELTINSGFDKNKQIGPKTQNFEEMKSFDEFMKAYKAQMEYFVKHMCCADNCIDIAHAERAP--LPFLSS---MVDNCIGKGKSLQDGGAEYN--FSGPQGVGVANIGDSLVAVKKIVFDENKITPSELKKTLNNDFKNSEEIQALLKNAPKFGNDIDEVDNLAREGALVYCREVNKYTNPRGGNFQPGLYPSSI--NVYFGSLTGATPDGRKSGQPLADGVSPSRGCDVSGPTA-ACNSVSKLDHFIASNGTLFNQKFHPSALKGDNGLMNLSSLIRSYFDQKGFHVQFNVI---DKK-ILLAAQ-------KNPEKYQD------LIVRVAGYSAQF--ISLDKSIQNDIIARTEHV----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R9D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96426 for 3757 contacts (-25.7/contact) +
2D Compatibility (PS) -47431 + (NN) -24220 + (LL) 18772
1D Compatibility (HY) 5200 + (ID) 2850
Total energy: -146955.0 ( -39.11 by residue)
QMean score : 0.354
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