Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VNNPKPCEWKSNELSRGYIADYKAFNFVDGEGVRCSLY-VSGCPFHCEGCYNKAAQSFKYGKPYTKELEDDILKDIGHESVQGLTLLGGE-PFLNT--ATCLSIVKRIRATYGETKDIWSWTGYTWDEMMQETADKL-ELLSLIDVLVDGRFEQKLFDPNLAFRGSSNQRIIDVQKSLAAGEVVLYEL
3T7V Chain:A ((61-205))
--------------------------------LNCFIYFSTYCKNQCSFCYYNCRNEI-NRYRLTMEEIKETCKTLKGAGFHMVDLTMGEDPYYYEDPNRFVELVQIVKEELGL-PIM-ISPG-LMDNATLL--KAREKGANFLALYQETYDTE-LYRKLRV--GQSFDGRVNARRFAKQQGYCVE--
General information:
TITO was launched using:
RESULT:
Template:
3T7V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36357 for 999 contacts (-36.4/contact) +
2D Compatibility (PS) -15104 + (NN) -3688 + (LL) 2128
1D Compatibility (HY) -6400 + (ID) 1000
Total energy: -60421.0 ( -60.48 by residue)
QMean score : 0.355
(partial model without unconserved sides chains):
PDB file :
Tito_3T7V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3T7V-query.scw
PDB file :
Tito_Scwrl_3T7V.pdb
: