Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRIFCGIMSIQAGFIGALAEILSPDSKKNNLFMIPEDLAAS----SGYLMSLAMVLAGILIICAYRNDFLIFMALILWLFGLIFGLIFTPSYSGFYFRPIVCLISFLMGLFIFTDYTRHQDTGEER |
2MZD Chain:B ((1-25)) | ----------------------LPSQAMDDLMLSPDDIEQWFTEDPG------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2MZD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 115 for 60 contacts (1.9/contact) +
2D Compatibility (PS) -2280 + (NN) -1958 + (LL) 9736
1D Compatibility (HY) -1200 + (ID) 250
Total energy: 4163.0 ( 69.38 by residue)
QMean score : 0.058
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