Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LKHNFTEDDFVYGESWGLVHRGVLEDKEVERMKALRDKVVGKKGVAQTTLKPIGSVRIDGEVYEARLKTGYLEVGKPIIAVGIDFGYVLVNEDIQEGEK
4UI9 Chain:D ((2-56))
STLYPSLFPRVTETLWFNLDRPCVEETELQQQEQQHQAWLQSIAEKDNNLVPIGK--------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4UI9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5644 for 182 contacts (31.0/contact) +
2D Compatibility (PS) -5724 + (NN) -1878 + (LL) 3104
1D Compatibility (HY) -800 + (ID) 450
Total energy: -104.0 ( -0.57 by residue)
QMean score : 0.224
(partial model without unconserved sides chains):
PDB file :
Tito_4UI9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4UI9-query.scw
PDB file :
Tito_Scwrl_4UI9.pdb
: