Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKQSADKRRIEK-NDKPFFYLADTVWSAFTNIDLTDWAYYLKVRK-EQGFNVLQINILPQWDRSVLKKIQEPFGINEGFFDLKAKN-EAYFKHAEKMLEMAVNQGFTPALVLLWCNYIPETWGAKFGTSPLFRKEDIKPYTEMMLEHFEQF-EPIYIISGDTDFP-TETVTDYYLEALETVSKKAPHALKVLHICGRLKDI-P-----ENLQTHPALD-LYFYQSGHNSEHQSMAYTLAEHFSQLEPIKPVINSEPCYELMGYSRQKYGRFSREDVRKAAWQSVLSGAIAGISYGAHGIWSWHEEGSTFGSALGEGFVSPFNWRQALHFEGATDYAFLKSFILANDLTTLAPINLVLNQTPEIRAAETEKVVIIYVPSNVPIYLKGQFVSLDDYAIDLEQGKKVSLAKILHEEKTEIQMTPFLKDSLYVIHK |
| 2CKS Chain:A ((11-235)) | ---VQVCGTQLCDEHGNPVQLRGMSTHGIQWFD-HCLTDSSLDALAYDWKADIIRLSMYIQE---------D---------G-YETNPRGFTDRMHQLIDMATARGLYVIVDWHILTPGD----------PHYNLDRAKTFFAEIAQRHASKTNVLYEIANEPNGVSWASIKSYAEEVIPVIRQRDPDSVIIVGTRGWSSLGVSEGSGPAEIAA-NPVNASNIMYAFHFYAASHR-DNYLNALREASELFPVFVTEFGTE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CKS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71084 for 1678 contacts (-42.4/contact) +
2D Compatibility (PS) -22645 + (NN) -9162 + (LL) 14532
1D Compatibility (HY) 0 + (ID) 1000
Total energy: -89359.0 ( -53.25 by residue)
QMean score : 0.287
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