Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPQKMTEHIITQALRINASDVHIHPLSNRYLLRLRVNGTLIPLLYLPIDVGEKLISFLKFQAALDISEKRRPQSGSFEKNTNTEKIALRLSTMPSKDFHESMVIRIFRYKHPIPFLNSSVFPRSTKQIQQQCKNQTGLFLFSGSTGSGKSSSMYSLASSIENKDELQIITIEDPVE--HYSPGFL--QIEVNEKASITYAPIIRSVLRHDPDILIIGEIRDAETAKIVIRAALTGHLVLSTVHAGDAYGVLLRLLE-FGISSEELAQCLLGISFQKLTLLVCAFCGEKCHPLCTHLRRKRTAIYEVLTKQDIKAYFQSNQQQIEPKYPIKRTFEKGVSYGFFSAY |
3JVV Chain:C ((124-268)) | ----------------------------------------------------------------------------------------------------------------------------------------GLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVH-RDTLGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRVVDVFPAEEKAMVRSMLSESLQSV-------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JVV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112990 for 997 contacts (-113.3/contact) +
2D Compatibility (PS) -15303 + (NN) -9787 + (LL) 15396
1D Compatibility (HY) -9600 + (ID) 2650
Total energy: -134934.0 ( -135.34 by residue)
QMean score : 0.590
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