Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEWSEVEVHTTNEAVEPVANVLTEFGAAGVSIEDVADFLREREDKFGEIYALRREDYPEDGVIIKAYFLKTTEFVEQIPEIEQTLKNLSTFDIPLGKFQFVVNDVDDEEWATAWKKYYHPVQITDRITIVPSWESYTPSANEIIIELDPGMAFGTGTHPTTQLCIRALSNYLQPGDEVIDVGTGSGVLSIASAKLGAKSILATDLDEIATRAAEENITLNKTEHIITVKQNNLLQDINKTNVDIVVANILAEVILLFPEDVYKALKPGGVFIASGIIEDKAKVVEEALKNAGLIIEKMEQQGDWVAIISKRGVE |
2NXE Chain:B ((41-254)) | ----------------------------------------------------------------------------------------APVDLP---YEGVWEEVG------AWRRDLKPALAPPFVVLAP-WHTW--EGAEIPLVIEPGMAFGTGHHETTRLALKALARHLRPGDKVLDLGTGSGVLAIAAEKLGGKA-LGVDIDPMVLPQAEANAKRNGVRPRFL--EGSLEAALPFGPFDLLVANLYAELHAALAPRYREALVPGGRALLTGILKDRAPLVREAMAGAGFRPLEEAAEGEWVLLAYGR--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NXE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102061 for 1764 contacts (-57.9/contact) +
2D Compatibility (PS) -22937 + (NN) -13629 + (LL) 8468
1D Compatibility (HY) -12800 + (ID) 3800
Total energy: -146759.0 ( -83.20 by residue)
QMean score : 0.537
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