Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKTMAEIQKEVDDFIGGFEEG-YFSPLAMMARITEETGELAREINHYYGEKPKKTSEPTKTVAEELGDCLFVLTCM----ANSLDIDMEKAHDTVMAKFKDRDKDRWTKKEEKAK
2YXH Chain:A ((1-97))
---MVERLLEIIERSLRKCPWLEKQSIETLLEALASEIEEVAEAVKKN----------DLANLEEEIGDMIYDALLVAAVAQRDYGIDLESAIQKVVEKISHRKPWLFWE------
General information:
TITO was launched using:
RESULT:
Template:
2YXH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6814 for 472 contacts (-14.4/contact) +
2D Compatibility (PS) -10313 + (NN) -7019 + (LL) 1164
1D Compatibility (HY) -6800 + (ID) 750
Total energy: -30532.0 ( -64.69 by residue)
QMean score : 0.322
(partial model without unconserved sides chains):
PDB file :
Tito_2YXH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2YXH-query.scw
PDB file :
Tito_Scwrl_2YXH.pdb
: