Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIEQARAILQQNFGYQDFRNGQVDVISKLCAGEDTLAIMPTGGGKSLCYQIPALLFDGLTIVVSPLISLMKDQVDALVSEGIAATFINSTLTNRE-IDIRLDAAFSGE-LKMLYIAPERIETPG-----FQRLIEQVPISLFAIDEAHCISQWGHDFRPSYLTLCDSLDKMTRRPLVIALTATATQAVSDDICRLLKIRADSVVKTGFSRDNLAFQVVKGQDKDKYL--IDYLTKNVT-ESGIIYASTRKEVERLHSFLQKKGVESGMYHGGMTDLARKDWQEKFLYDD-IRVIVATNAFGMGINKSNVRFVIHYNIPRNIEAYYQEAGRAGRDGVPSDCILLFSPQD-SRIQQFLIEQSEMDDERKQNEFAKLRQMTGY--GYTEICLQKYIVQYFGDDEPN---CGK-----CSNCL-----DTREATD----ITILAQQVFSCIKRMGE-RFGKVLIAKVLTGSADQKVKDWRFDELSTYGLMKDASQKDVLQLIDYLTAEKYLQPTDSQFPSLKLTDRAVSVLRGELKVERKQAKRAEKV-----KIDVNSDLFEK----LREVRRELAAKHKVPPYIIFSDETLREMCAYMPQTEDALLEVKGIGAMKRDKYGAEFLAVLQQEASK |
4CDG Chain:B ((25-651)) | -------IFHKKFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTVVISPLRSLIVDQVQKLTSLDIPATYLTGDKTDSEATNIYLQLSKKDPIIKLLYVTPEKICASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKFPSVP-VMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHHPYDSGIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSARDEVQQKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEISHCLLFYTYHDVTRLK-------------RETHFNNLYSMVHYCENITE-CRRIQLLAYFGENGFNPDFCKKHPDVSCDNCCKTKDYKTRDVTDDVKSIVRFVQEHS--------GRFTMNMLVDIFLGSKSAKIQSGIFGKGSAYSRHNAERLFKKLILDKILDEDLYIN---QAIAYVMLGNKAQTVLNGNLKVDFMETENSSSVKKQKA-VSQREEMVKKCLGELTEVCKSLGKVFGVHYFNIFNTVTLKKLAESLSSDPEVLLQIDGVTEDKLEKYGAEVISVLQK---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CDG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -271817 for 4344 contacts (-62.6/contact) +
2D Compatibility (PS) -59314 + (NN) -19732 + (LL) 3316
1D Compatibility (HY) -48800 + (ID) 10500
Total energy: -406847.0 ( -93.66 by residue)
QMean score : 0.451
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