Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVTVEKNRAVTFQANKELVSEAMTVLNKKNLTLSSALRLFLQNVVVTNEVDLLTEEELEKEKLFKQFQAEISKNIEDVRQGKFYTSEEVRAELGL
2KEL Chain:A ((11-54))
----KQKAVFGIYMDKDLKTRLKVYCAKNNLQLTQAIEEAIKEYLQKRNG---------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2KEL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18498 for 203 contacts (-91.1/contact) +
2D Compatibility (PS) -4702 + (NN) -2916 + (LL) 4952
1D Compatibility (HY) -2400 + (ID) 350
Total energy: -23914.0 ( -117.80 by residue)
QMean score : 0.535
(partial model without unconserved sides chains):
PDB file :
Tito_2KEL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KEL-query.scw
PDB file :
Tito_Scwrl_2KEL.pdb
: