Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNINGIKLLSSRAVSKLGDVLYDYGNSTWIASMGGLGQKILGIYQIVELLVSIVLNPFGGALADRFQRRKILLITDAI--CAIMCFLLSFIGDD--KVMVYGLI----VANAILAVSNAFSSPAYKSYIPEIVDKADIITYNANLETIVQIISVSSPVLGFLIFNNFGIRITLIVDAITFLISFLFLYAIKVERVQLSKQEKVAIKNILADIADGFTYIKKEKEIMFFLIIAALLNTFLAMFNYLLPFTNSLLKTSGAYATILSISAI-GSIIGALIARKIKSSINSMLSMLVFSSLGVIVMGFPSLFELPIWISYSGSFLFNSLLTMFNIHFFSQV |
| 3WZM Chain:A ((15-278)) | --------MRTRSTISTPN------GITWYYEQEGTGP-------------------------------DVVLVPDGLGECQMFDSSVSQIAAQGFRVTTFDMPGMSRSAKAPPETYTEVTAQKLASYVISVLDALDI-----KHATVWGCASGASTVVALLLGYPDRIRNAMCHELPTKLLDHLSNTAVL---------EDEEISKILANVMLNDVSGGSEAWQAMGDEVHARLHKNYPVWARGYP------RTIPPSAPVKDLEALRGKPLDWTVGAA-TPTESFFDNIVTATKAGVNIGLLPGMH--FPYVSHPDVFAKYVVETTQKHL----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WZM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -267041 for 2230 contacts (-119.7/contact) +
2D Compatibility (PS) -26332 + (NN) 2649 + (LL) 6524
1D Compatibility (HY) -1600 + (ID) 2400
Total energy: -288200.0 ( -129.24 by residue)
QMean score : 0.195
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