Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLIKLKKIVQIERKPFFITRQKLKLFRIVFNIIFVLMLFYYWSAIPLLLPRLIVVIFLLGSIFLTNKAFIAIKKRIGKTLFIRERLWYILESLKLYDSDGDRILNTAILTFDISNDNAVTISAPLFGDKWTKRLKNLEDNLVAGLGLPLLSKKELPNCVIYQLGHIEEIEQYVFNNNLTRKFFQSISSPVIKLSNTQQFSLKSNTNIGVYGRTGTGKTIALQWFLFNALAKGCGTDDSTYLGIVDGKGADLYALGKLLQEELGEQIAIGSSPQMLAKLSREFVDIMNARFEVIKQNSSLNADAYDLEMTPNFLFVDELASIRDSCGSSK-QGKELWNEILQNLGLIARKGRQAGCHLLLSTQDPNAENIPVELRNQISAVLYLGNPGADRLKMAFSMCELENVPTVSDRKGEALFHADGLNSIEPVLTIVPFVDVKTKQDFLQIVRNILPNY |
| 3VFD Chain:A ((207-292)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QPSIIFIDQVDSLL-------DASRRLKTEFLIEFDGVQ------RVLVMGATNRPQE--LDEAVLRRFIKRVYVSLPNEETRLLLLK-------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VFD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -33601 for 371 contacts (-90.6/contact) +
2D Compatibility (PS) -7911 + (NN) -5963 + (LL) 28444
1D Compatibility (HY) -6400 + (ID) 550
Total energy: -25981.0 ( -70.03 by residue)
QMean score : 0.366
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