Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
METRNEKFRRLSEARMTKVFSILNILRNQSDKSKYTFSKSDIEELFGALEQKGEEIKEFFTSPITIKTVNLKNSFHYSVVDTSNDKEVSFKKLSTARVEKIFSLMNLIANLSNKSNYNYSDWEVEELFSAYDEEVKKCKVFFEEKRTVFKYS
1HF0 Chain:A ((6-158))
LEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEAL-------------NLSFKNMSKLKPLLEKWLNDAERKKRTSIETNIRVALEKSFLE-----------NQKPTSEEITMIADQLNMEKEVIRVWFSNRRQKEKRI
General information:
TITO was launched using:
RESULT:
Template:
1HF0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7735 for 806 contacts (-9.6/contact) +
2D Compatibility (PS) -13529 + (NN) -4130 + (LL) 1864
1D Compatibility (HY) 1200 + (ID) 1050
Total energy: -23380.0 ( -29.01 by residue)
QMean score : 0.348
(partial model without unconserved sides chains):
PDB file :
Tito_1HF0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HF0-query.scw
PDB file :
Tito_Scwrl_1HF0.pdb
: