Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MASIIYSPKDIFEQDFKVSMRGYDKKEVDVFLDDVIKDYENYLEQIEKLQMENRRLQQALDKKESEASNVRNSGTAMYNQKPIAQSATNFDILKRISRLEKEVFGRQIRE
2JEE Chain:A ((16-53))
--------------------------------QQAIDTITLLQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQQNGWQERLQALLGRMEEV------------
General information:
TITO was launched using:
RESULT:
Template:
2JEE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4271 for 147 contacts (29.1/contact) +
2D Compatibility (PS) -4430 + (NN) -3011 + (LL) 2768
1D Compatibility (HY) -2000 + (ID) 350
Total energy: -2752.0 ( -18.72 by residue)
QMean score : 0.648
(partial model without unconserved sides chains):
PDB file :
Tito_2JEE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JEE-query.scw
PDB file :
Tito_Scwrl_2JEE.pdb
: