Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTNEKGIVFNIQHFSIHDGPGIRTTVFLKGCPLRCPWCANPESQKMVPETMRDAITNESVIVGEEKSVDDIIEEVLKDIDFYEESGGGITLSGGEIFAQFEFAKAILKRAKSL-GI-HTAIETTAYTRHEQFVDLIQ-YVDFIYTDLKHYNSLKHQEKTM--VKNASIIKNIHYAFANGKTIVLRIPVIPNFNDSLEDAEEFACLFDRLDIRQVQLLPFHQFGQNKYRLLNRQYEMEEIAALHPEDLLDYQAIFSKYNIHCYF |
1TV8 Chain:A ((15-201)) | ---------------------DLRLSVTDRCNFRCDYCMPKEVFGDDFVF---------LPKNELLTFDEMARIAKVYAE-LG--VKKIRITGGEPLMRRDL-DVLIAKLNQIDGIEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLFQSINNRNIKATTILEQIDYATSIGLNVKVNVVIQKG--INDDQIIPMLEYFKDKHIE-IRFIEFMDVGNDNGWDFSKVVTKDEMLTMIEQHFEIDPVEPKYFGEVAKY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TV8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85188 for 1345 contacts (-63.3/contact) +
2D Compatibility (PS) -19962 + (NN) -11385 + (LL) 1936
1D Compatibility (HY) -7200 + (ID) 1400
Total energy: -123199.0 ( -91.60 by residue)
QMean score : 0.425
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