Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDIQEIKDLMTQFDESSLREFSFKTSDGELSFSKNEGKAPLVPTMSPMSHQPEATPTIATPVSNEAGEQTKQATEVVSEIPESTVTVAEGDVVESPLVGVAYLASGPDKPNFVSVGDSVKKGQTLMIIEAMKVMNEVPAPHDGVVTEILVANEEVIEFGKGLVRIK
4HR7 Chain:D ((99-176))
----------------------------------------------------------------------------------------SGHIVRSPMVGTFYRTPSPDAKAFIEVGQKVNVGDTLCIVEAMKMMNQIEADKSGTVKAILVESGQPVEFDEPLVVIE
General information:
TITO was launched using:
RESULT:
Template:
4HR7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46579 for 509 contacts (-91.5/contact) +
2D Compatibility (PS) -8225 + (NN) 353 + (LL) 5356
1D Compatibility (HY) -8800 + (ID) 1700
Total energy: -59595.0 ( -117.08 by residue)
QMean score : 0.541
(partial model without unconserved sides chains):
PDB file :
Tito_4HR7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HR7-query.scw
PDB file :
Tito_Scwrl_4HR7.pdb
: