Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAQSLNKTVEFQTTGVSYLGMGNKVGKFLVGDQALEFYNDKNVNDYIQIPWTSINQIGANVSRKKISRHFEVFTDQGKFLFASKDSGTILKHARRHIGDDKVVKLPTLIQTILKIFKFKK
3AU4 Chain:A ((1970-2039))
------------------------ELWLGVSADAVSVYKRGEGRPLEVFQYEHILSFGAP--LA---NTYKIVVDERELLFETSEVVDVAKLMKAYISM---------------------
General information:
TITO was launched using:
RESULT:
Template:
3AU4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24614 for 410 contacts (-60.0/contact) +
2D Compatibility (PS) -7418 + (NN) -3621 + (LL) 4000
1D Compatibility (HY) -5200 + (ID) 550
Total energy: -37403.0 ( -91.23 by residue)
QMean score : 0.506
(partial model without unconserved sides chains):
PDB file :
Tito_3AU4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3AU4-query.scw
PDB file :
Tito_Scwrl_3AU4.pdb
: