Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------------MINDKNRYRGSLLAQSILKEKVTRTVTKDE----MLETVNLDYRRLIIIQLVS-IAFGGMAIWCLIALVLLTVVGILICSLHNDLPFVTAIPIESP--------IKMIWLE-----GWQINVAIG-----------LIGTFGIFLDKWATNKMDALREATDKKQLTKDYLAWKEEHNG
4QT4 Chain:A ((1-189))
MVKMIVGLGNPGSKYEKTKHNIGFMAIDNIVKNLDVTFTDDKNFKAQIGSTFINHEKVYFVKPTTFMNNSGIAVKALLTYYNIDITDLIVIYDDLDME-VSKLRLRSKGSAGGHNGIKSIIAHIGTQEFNRIKVGIGRPLKGMTVINHVMGQFNTEDNIAISLTLDRVVNAVKFYLQENDFEKTMQKFNG
General information:
TITO was launched using:
RESULT:
Template:
4QT4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77524 for 1031 contacts (-75.2/contact) +
2D Compatibility (PS) -16300 + (NN) -7042 + (LL) 132
1D Compatibility (HY) -6000 + (ID) 1250
Total energy: -107984.0 ( -104.74 by residue)
QMean score : 0.338
(partial model without unconserved sides chains):
PDB file :
Tito_4QT4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QT4-query.scw
PDB file :
Tito_Scwrl_4QT4.pdb
: