Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVVLGKLPDGIFTLLRFN---DEGGQLTHISESEALWLTLELAPEKMDCI
2VPZ Chain:A ((96-123))
----------KRPLIRVEGSQRGEGKYRVATWEEALDH------------
General information:
TITO was launched using:
RESULT:
Template:
2VPZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5786 for 105 contacts (-55.1/contact) +
2D Compatibility (PS) -2573 + (NN) 316 + (LL) 1520
1D Compatibility (HY) 0 + (ID) 300
Total energy: -6823.0 ( -64.98 by residue)
QMean score : 0.167
(partial model without unconserved sides chains):
PDB file :
Tito_2VPZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2VPZ-query.scw
PDB file :
Tito_Scwrl_2VPZ.pdb
: