Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKQIKIITGLTVATLSAVVGNVYAEDITPTAPVNEPQVSSETAKTPQVTESQVNSAKVTADQAISDVNNQQIVVDEAQKQKDQSQQNLVKATSTVTEAEKVAAEATPEVVKEAIKAVTEAKEAVTDAEANVVDAQKTEQKANQEVQSQAKTVDENVKVVADKESEVKQAEGVVTTAQEAIDSKTANTNASEAEKAVTEKQTKLETAETNLTEAQKQDAKIAEEKRLAEQEVVNKQLAVTDTQTLLKKLVTEINNEKVSTSLENQAYFNQRDGSWAGYYGNYTFAATGCVPSSLAMVFTELARRQITPTEIANYLWNNSNEFNKNYGGTSGKGLVQATKHFGFVPTHLASQSAIVEALQAGHHVLAAVQQDKFSPWGINYSHEIVLRGYSNGNTYVYDPYNRANIGWYPVANLWNEQSRDAIDTSSVGVPFFKITTQKMAQLEAQKAQVQSSLNTAKNQLAKTQDVLRTLEATPLKTPEAQAKLNQAKEALALAQADYTKAQEAVKLASQDLAVKEETLKNAQADLLTKQTALKDAQTVLVASQVKLADLKATLATVENNVKKAQATLTDAKAIVGQKQAKLLALQNAPKILADAQAKLVTAKNDLANKMAILDEAVAKLKSLQAVQAEAQKQYHVVFEAYKAVRDAKEQAKLAESYNHIIARGGEAIPVVDETDKITGYVDGSQKAVANEVTLALTSNGAPLESPVNKENQNVTKSSQALPHTGEAGLSILSVLGVGLISTLGLTSLKKRRPH |
3U0C Chain:A ((136-201)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DYEKQINKLKNADSKIKDLENKINQIQTRLSELDPESPEKKKLSREEIQLTIKKDAAVKDRTLIEQ---------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3U0C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6043 for 344 contacts (17.6/contact) +
2D Compatibility (PS) -7352 + (NN) -6405 + (LL) 52292
1D Compatibility (HY) 800 + (ID) 400
Total energy: 44978.0 ( 130.75 by residue)
QMean score : 0.814
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