Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLQENKTAIFDNVSKLALKAGRAPESVHIVAVTKYVNCQTTEALI-RTGVNHIGENRVDKFLEKYQA-LKDEKLTWHLIGSLQR-RKV---KDVIN--YVDYFHALDSVKLAAEIQKR---AQKPVKCFLQVNISREDSKHGFTIEQ-IDDALNLISR-YDKIELIGIMTMAPLKATKEEISSIFEETESLRKRLQA--RNIERMPFTELSMGMSRDYDIAIQ---------NGSTFVRIGTSFFK |
| 3GWQ Chain:A ((48-283)) | -AAVLYADRVEHNLKWMQAFVA--EYGVKLAPHGKTTMAPQLFRRQLETGAWGITLATAHQVRAAYHGGV---S-RVLMANQLVGRRNMMMVAELLSDPEFEFFCLVDSVEGVEQLGEFFKSVNKQLQVLLELGVPG--GRTGVRDAAQRNAVLEAITRYPDTLKLAGVELYEGVLKEEHEVREFLQSAVAVTRELVEQERFA--RAPAVLSGAGSAWYDVVAEEFVKASETGKVEVVLRPGCYLTH |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GWQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105619 for 1601 contacts (-66.0/contact) +
2D Compatibility (PS) -22466 + (NN) -2880 + (LL) 952
1D Compatibility (HY) -6400 + (ID) 1600
Total energy: -138013.0 ( -86.20 by residue)
QMean score : 0.463
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