Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEMSFRWYGEDDPVTLENIGQIPTMKGIVTAIYDVPVGEVWSRERIQQLKEKVEAAGLKISVIESVPVHEDIKLGRPTRDLLIDNYIQTVKNLAAEGIDTICYNFMPVFDWTRTDLAYQYPDGSTALIFD------------------------------ETVSKKMDPVNGELS------LPGWDASYSKEEMKAIMDAYAEIDEEKLWENLTYFIKRIIPEAEAVGVKMAIHPDDPPYSIFGLPRIITGLEAIERFVKLYDSKSNGITLCVGSYASDPQNDVLEISRRAFELDRVNFVHARNIKLGDG-KSFKESAHPSEYGSIDMYEVIKLC----HEFGFEGA-----IRPDHGRMIWGETGR---PGYGLYDRALGATYLSGLYEAVIKGSK |
4EAY Chain:C ((21-410)) | MEQTWRWYGPNDPVSLADVRQAGAT-GVVTALHHIPNGEVWSVEEILKRKAIIEDAGLVWSVVESVPIHEDIKTHTGNYEQWIANYQQTLRNLAQCGIRTVCYNFMPVLDWTRTDLEYVLPDGSKALRFDQIEFAAFEMHILKRPGAEADYTEEEIAQAAERFATMSDEDKARLTRNIIAGLPGAEEGYTLDQFRKHLELYKDIDKAKLRENFAVFLKAIIPVAEEVGVRMAVHPDDPPRPILGLPRIVSTIEDMQWMVDTVNSMANGFTMCTGSYGVRADNDLVDMIKQFGP--RIYFTHLRSTMREDNPKTFHEAAHLN--GDVDMYEVVKAIVEEEHRRKAEGKEDLIPMRPDHGHQMLDDLKKKTNPGYSAIGRLKGLAEVRGVELAIQRAFF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EAY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -167580 for 2783 contacts (-60.2/contact) +
2D Compatibility (PS) -36793 + (NN) -18455 + (LL) 360
1D Compatibility (HY) -25200 + (ID) 7750
Total energy: -255418.0 ( -91.78 by residue)
QMean score : 0.541
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