Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFTGIIEEMGQVSRIRNGIKSQQLSIDAPKLVPLLRKGDSVAVNGVCLTVL---DKSETA--FIADVMPESMMRTSLAALRLHSKVNLELALRSDSRLGGHFVLGHVDGVGKIEKIQKDDIAVRFSIDAPPSIMSYIIEKGSVALDGISLTVVSFTEHSFEVSVIPHTMAQTNLSLKKVGDLLNIEVDVLGKYAEKFLAPTNRTNHTSSVMDWSFLSENGY
4G6I Chain:C ((1-197))
MFTGIITDIGKVDRVKPLNEGVLLRIETAYDPETIELGASIACSGVCLTVVALPEKGSNARWFEVEAWEEALRLTTISSWQSGRKINLERSLKLGDEMGGHLVFGHVDGQAEIVERKDEGDAVRFTLRAPEELAPFIAQKGSVALDGTSLTVNGVNANEFDVLLIRHSLEVTTWGERKAGDKVNIEIDQLARYAARLAQ----------------------
General information:
TITO was launched using:
RESULT:
Template:
4G6I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107848 for 1491 contacts (-72.3/contact) +
2D Compatibility (PS) -19655 + (NN) 5598 + (LL) 1020
1D Compatibility (HY) -13600 + (ID) 3700
Total energy: -138185.0 ( -92.68 by residue)
QMean score : 0.341
(partial model without unconserved sides chains):
PDB file :
Tito_4G6I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4G6I-query.scw
PDB file :
Tito_Scwrl_4G6I.pdb
: