Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDAKFDFAKLLVYKAGQFIKSEMQNTFDVEEKSRFDDLVTSLDKKTQKLLIQEIIQHYPDDNILAEE---DDVRSPIAQGNVWVLDPIDGTVNFIVQKDNFAVMLAYYEEGVGQFGIIYDVMADILYSGGGHFDVYANDKKIVPFQECPLERCLLGVNSAMYAENDCG--IAHLASETLGVRIYGGAGISMAKVMQGKLLAYFS-YIQPWDYAAAKIMGETLGFTLLTLDGEEPNYSTRQKVMFLPKSKLNLIQSYLTKK
3T0J Chain:B ((10-223))--ALYGFAQGLIQEAGIRIKQLMEQNL------NPNDLVTNVDKATEDFIFDTILETYPNHQVLGEEGHGHDIDT--SKGTVWVVDPIDGTLNFVHQQENFAISIGIYIDGKPYAGFVYDVMADVLYHAKVGEGAYRGSQPLKPLNDSNLRQSIIGINPNWLTKPILGEIFKEIVNDSRSARAYGSAALEIVSVATGNLEAYMTPRLQPWDFAGGLVILYEVNGQASNLLGEPLTISGPNSILVGNRGLHQEISNDYLEP


General information:
TITO was launched using:
RESULT:

Template: 3T0J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -149593 for 1574 contacts (-95.0/contact) +
2D Compatibility (PS) -21449 + (NN) -7117 + (LL) 556
1D Compatibility (HY) -18000 + (ID) 3500
Total energy: -199103.0 ( -126.49 by residue)
QMean score : 0.540

(partial model without unconserved sides chains):
PDB file : Tito_3T0J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3T0J-query.scw
PDB file : Tito_Scwrl_3T0J.pdb: