Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATIKEIKAILETIVDLKDKRWQEYQTDSRAGVQKAILQRKKNIQSDLDEEARLEQMLVYEKKLYIEHINLIAGIDEVGRGPLAGPVVAAAVILPPNCKIKHLNDSKKIPKKKHQEIYQNILDQALAVGIGIQDSQCIDDINIYEATKHAMIDAVSHLSVAPEHLLIDAMVLDLSIPQTKIIKGDANSLSIAAASIVAKVTRDKIMSDYDSTYPGYAFSKNAGYGTKEHLEGLQKYGITPIHRKSFEPIKSML
2ETJ Chain:A ((20-204))
-----------------------------------------------------------------KKEFGIVAGVDEAGRGCLAGPVVAAAVVLEKE--IE----------AKRERLLDEIMEK-AAVGIGIASPEEIDLYNIFNATKLAMNRALENLSVKPSFVLVDGKGIELSVPGTCLVKGDQKSKLIGAASIVAKVFRDRLMSEFHRMYPQFSFHKHKGYATKEHLNEIRKNGVLPIHRLSFEPVLELL
General information:
TITO was launched using:
RESULT:
Template:
2ETJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -104497 for 1465 contacts (-71.3/contact) +
2D Compatibility (PS) -18780 + (NN) -4124 + (LL) 7048
1D Compatibility (HY) -17600 + (ID) 4300
Total energy: -142253.0 ( -97.10 by residue)
QMean score : 0.531
(partial model without unconserved sides chains):
PDB file :
Tito_2ETJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ETJ-query.scw
PDB file :
Tito_Scwrl_2ETJ.pdb
: