Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNTHINITLDMG-ETSKDLRIPLKISVKQLVMELDSIFSRTERRTKYQLRVINKGILLGENDILAHHPVTTGDRIRIEEFY
1WM3 Chain:A ((18-86))
----INLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLS--MR--QIRFRFDGQPINETDTPAQLEMEDEDTIDVFQ--
General information:
TITO was launched using:
RESULT:
Template:
1WM3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46282 for 450 contacts (-102.8/contact) +
2D Compatibility (PS) -7121 + (NN) -1461 + (LL) 792
1D Compatibility (HY) -1600 + (ID) 600
Total energy: -56272.0 ( -125.05 by residue)
QMean score : 0.607
(partial model without unconserved sides chains):
PDB file :
Tito_1WM3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WM3-query.scw
PDB file :
Tito_Scwrl_1WM3.pdb
: