Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MIDTFKVKWFKRGMSLLVLILVFFLGLGFGQMGNSSQSKDRPKQTATKKTRTN----------TITQTQVKEFLVAYYTKKDLEENRNRYKDYMTEGLYNATISEENKAQNQAYRGFVVNFEFQDANIYIDQVHKQVICEVTYTNDLLQKKNNKDGAQIGVVNHTTIQLAY-----------TKLNGK---------YLINQMSTILLTDSANPSEETESYGAIAPSNTKD-------------------- |
| 1E6V Chain:B ((190-442)) | GYALRNIMVNHIVAATRKNTMQAVCLAATLQQTAMFE-MGDALGPFERLHLLGYAYQGLNADNMVYDIVKKHGKEGTVGTVVREVVERALEDGVIEVKEELP-SFKVYKANDMDLWNAYAAAGLVAAVMVNQGAA---RAAQGVSATILYYNDLLEYETGLPGVDFGRAEGTAVGFSFFSHSIYGGGGPGIFHGNHIVTRHSKGFAIPPVAAAMALDAGTQMFSPEVTSKLIGDVFGEIDEFREPMKYITEAAAEEAK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1E6V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7309 for 1679 contacts (4.4/contact) +
2D Compatibility (PS) -20388 + (NN) -8090 + (LL) 444
1D Compatibility (HY) -2800 + (ID) 1450
Total energy: -24975.0 ( -14.87 by residue)
QMean score : 0.116
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