Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRRVYSFLGGIILVILILFGLTTYLEKKSSSTPNSDKLVIYNWGDYIDPALLKKFTKETGIEVQYETFDSNEAMHTKIKQGGTTYDIAVPSDYMIDKMIKENLLVKLDHSKIANWDAIGARFKNL--SFDPKNKYSIPYFWGTVGIVYNDQLVK------TPPKHWDDLWRPEFRNK-----IMLVDSAREVIGVGLNSLGYGLNTKNISELKA-ASKKLDALTPNVKAIVADEMKGYMIQGDAAIGVTFSGE-------AREMLDGNKHLHYVVPSEGSNLWFDNIVIPKTVKHRKEAYAFINFMMEPKNAAQNAEYIGYATPNLKAKALLPADIKNDKAFYPPDKTIDHLEVYNNLGQKWLGIYNDLYLQFKMYRK |
1A99 Chain:D ((6-312)) | -------------------------------------LHIYNWSDYIAPDTVANFEKETGIKVVYDVFDSNEVLEGKLMAGSTGFDLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNG-VNVSFSIPKEGAMAFFDVFAMPADAKNKDEAYQFLNYLLRPDVVAHISDHVFYANANKAATPLVSAEVRENPGIYPPADVRAKLFTLKVQDPKIDRVRTRAWTKVKSG-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1A99.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -116241 for 2306 contacts (-50.4/contact) +
2D Compatibility (PS) -31168 + (NN) -19670 + (LL) 2520
1D Compatibility (HY) -20000 + (ID) 4850
Total energy: -189409.0 ( -82.14 by residue)
QMean score : 0.525
|
|
|