Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSYEKLLERFLTYVKINTRSNPNSTQTPTTQSQVDFALTVLKPEMEAIGLKDVHYLP-------SNGYLVGTLPATSDRLCHKIGFISHMDTAD-FNAENITPQIVDYKGGDIELGDSGYILSPKDFPNLNNYHGQTLITTDGKTLLGADDKSGIAEIMTAMEYLASHPEIEHCEIRVGFGPDEEIGI-GADKFDVKDFDVDFAYTVDGGP-LGELQYETFSAAGLELTFEGRNVHPGTAKNQMINALQLAMDFHSQLPENERPEQTDGYQGFYHLYDLSGT------VDQAKSSYIIRDFEEVNFLKRKHLAQDIADNMNEALQSERVKVKLYDQYYNMKKVIEKDMTPINIAKEVMEELDIKPIIEPIRGGTDGSKISFMGIPTPNLFAGGENMHGRFEFVSLQTMEKAVDVILGIVAKD |
| 3GB0 Chain:A ((4-370)) | -NQERLVNEFMELVQVDSETKF----------EAEICKV-LTKKFTDLGVE-VFEDDTMAVTGHGAGNLICTLPATK-DGVDTIYFTSHMDTVVPGN-----GIKPSI--------------------------KDGYIVSDGTTILGADDKAGLASMFEAIRVLKEKNI-PHGTIEFIITVGEESGLVGAKALDRERITAKYGYALDSDGKVGEIVVAAPTQAKVNAIIRGKTAHAGVAPEKGVSAITIAAKAIAKMPLGRI-----DSETTANIGRFEGGTQTNIVCDHVQIFAEARSLINEKMEAQVAKMKEAFETTAKEMG-GHADVEVNVMYPGFK--FADGDHVVEVAKRAAEKIGRTPSLHQSGGGSDANVIAGHGIPTVNLAVGYEEIHTTNEKIPVEELAKTAELVVAIIEEV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128549 for 3076 contacts (-41.8/contact) +
2D Compatibility (PS) -38010 + (NN) -18285 + (LL) 1372
1D Compatibility (HY) -11200 + (ID) 4100
Total energy: -198772.0 ( -64.62 by residue)
QMean score : 0.506
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