Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQVQKSFKSNTHYGTLYLVPTPIGNLDDMTFRAIRILREVDFICAEDTRNTGLLLKHFDITTKQISFHEHNAYDKISGLIDLLKEGRSLAQVSDAGMPSISDPGHDLVKAAIEGGIPVVSIPGASAGITALIASGLAP------QPHIFYGFLPRKKG-QQITFFETKKDYPETQIFYESPFRVSDTLKHMKEIYG-DRQVVLVRELTKLYEEYQRGTISQLLGHIEKVPLKGECLIIVDGKRDTERVKDSSQQDPLVLVKEYIANGDKTNQAIKKVAKELNLNRQELYASFHDL |
| 3NDC Chain:A ((2-234)) | -----------SHMTVHFIGAGPGAADLITIRGRDLIASCPVCLYAGSLVPEALLAHCPPGAKIVNTAPMSLDAIIDTIAEAHAAGQDVARLH-SGDLSIWSAMGEQLRRLRALNIPYDVTPGVPSFAAAAATLGAELTLPGVAQSVILTRTSGRASAMPAGETLENFARTGAVLAIHLSVHVLDEVVQKLVPHYGEDCPVAIVWRASWPDQRVVRATLATLQTSLG-AELERTALILVGRSLATEDF----------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NDC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104526 for 1788 contacts (-58.5/contact) +
2D Compatibility (PS) -24386 + (NN) -13086 + (LL) 4280
1D Compatibility (HY) -2000 + (ID) 2000
Total energy: -141718.0 ( -79.26 by residue)
QMean score : 0.467
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