Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQLNQRQERIIDIIKQFQPITGELIAEKLGVTRAALRSDLAVLSMLGIIDAKPKVGYFYLGQYHASIGTSHFEKMTVSEIMGIPLTVHQKDSVYDVIVHIFMEDAGCAFILDDDDFLCGVVSRKDLLKTSIGGGDLSKMPIGMVMTRMPHVTTVLENESLFAAADKLVSRKVDSLPVVRHD---KQYPEKFKVIGKLSKTILASLFLEIRDY
3FV6 Chain:A ((73-207))
---------------------------------------------------------------------DKLKKLQVKDFQSIPVVIHENVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLLRASIGQQELTSVPVHIIMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGF------EVIGRVTKTNMTKILVSLSEN
General information:
TITO was launched using:
RESULT:
Template:
3FV6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82761 for 960 contacts (-86.2/contact) +
2D Compatibility (PS) -14180 + (NN) -3794 + (LL) 6196
1D Compatibility (HY) -18000 + (ID) 2400
Total energy: -114939.0 ( -119.73 by residue)
QMean score : 0.543
(partial model without unconserved sides chains):
PDB file :
Tito_3FV6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FV6-query.scw
PDB file :
Tito_Scwrl_3FV6.pdb
: