Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLPTEIRYRPYDEWTEEDKENIVKNVSKSPWRATYHLEAKTGLLNDPNGFSYFNGKFHLFYQNWPFGAAHGLKQWVHTESDDLVHFKETGIKLKPDHVNDSHGAYSGSALAIDDKLFLFYTGNVRDMK-WNRDPRQIGAWMTSDGK-ITKFD-KVLIS-QPNDVTEHFRDPQIFNYDNQFYAVIGAQNSKKCGFIKLYKALNNDIHHWEFVGDLDFGGTGSEYMIECPNIIFVKGKPVLLYSPQGLDKNELDYQNIYPNTYKIGQYF-DANSSKIVEPSPIYNLDYGFEAYATQGFNTSDGRAFIVSWIGLPDI--DYPSDQFDYQGAMSLVKELSIKNGNLYQYPVPAMKNLRQHQAEFK---T--QLQ-TNNTYELELLVPRNDLSSFVLFANPKGQGLSITIDTAKGKVIVDRSQAGQQYATEFGTSRQCNIP-KDATSVNVFIDKSIFEIFINKGEKVFTGRVFPDAEQSGIQLKEGHVHGKYFELKY |
| 1W2T Chain:A ((2-428)) | -------------------------------FKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLPVALYPDD--ETHGVFSGSAVEKDGKMFLVYTYYRDPTHNKGEKETQCVVMSEN-GLDFVKYDGNPVISKPPEEGTHAFRDPKVNRSNGEWRMVLGSGKDEKIGRVLLYTS--DDLFHWKYEGAIFED--ETTKEIDCPDLVRIGEKDILIYSITST----------NSVLFSMGELKEGKLNV-----EKRGLLDHGTDFYAAQTFFG-TDRVVVIGWLQSWLRTGLYPTKREGWNGVMSLPRELYVENNELKVKPVDELLALRKRKVFETAKSGTFLLDVKENSYEIVCEFSG----EIELRMGN--ESEEVVITKSRDELIVDTTRSGVS----GGEVRKSTVEDEATNRIRAFLDSCSVEFFFNDS-IAFSFRIHPENVYNILSVKSNQVKLEVFELEN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W2T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145525 for 3572 contacts (-40.7/contact) +
2D Compatibility (PS) -44273 + (NN) -8454 + (LL) 2900
1D Compatibility (HY) -23200 + (ID) 5900
Total energy: -224452.0 ( -62.84 by residue)
QMean score : 0.424
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