Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MNETLLLHGIQLILIIAMIITFYQIVRHIRSQKINPFKRFFTGLWIGFVTDALDTLGIGSFATTTTFFKLTKLVEDDRK--IPATMTAAHV------LPVLL-QSLCFIFVVKVEALT---------------------------LITMAGAAFIGAFVGAKMTKNWHAPTVQRILGTL-----LITAAIIMLYRMI-TNPGAGIS-DSVHGLHGIWLFVGIVFNFIIGVLMTMGLGNYAPELIFFSLMGLSPAVAMPVMMLDAAMIMTASSTQFIKSGRVNWNGFAGLVTGGILG---------------VIVAVLFLTNLDLNSLKTLVVGI--VLFTGAMLIRSSFKK---TMPKSHH |
| 3THI Chain:A ((1-362)) | ITLKVAIYPYVPDPARFQAAVLDQWQRQEPGVKLEFTDWDSYSADPPDDLDVFVLDSIFLSHFVDAGYLLPFGSQDIDQAEDVLPFALQGAKRNGEVYGLPQILCTNLLFYRKGDLKIGQVDNIYELYKKIGTSHSEQIPPPQNKGLLINMAGGTTKASMYLEALIDVTGQYTEYDLLPPLDPLNDKVIRGLRLLINMAGEKPSQYVPEDGDAYVRASWFAQGSGRAFIGYSESMMRMGDYAEQVRFKPISS-SAGQDIPLFYSDVVSVNSKTAHPELAKKLANVMASADTVEQALRPQADGQYPQYLLPARHQVYEALMQDYPIYSELAQIVNKPSNRVFRLGPEVRTWLKDAKQVLPEALG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3THI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -287526 for 2328 contacts (-123.5/contact) +
2D Compatibility (PS) -30128 + (NN) 6017 + (LL) 176
1D Compatibility (HY) -5600 + (ID) 2350
Total energy: -319411.0 ( -137.20 by residue)
QMean score : 0.124
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