Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTYYLSIDYGGTNTKALIFDKLGHQIAVSSFETLK-NETQSGHRQVNLVKTWNAITSAIREVIQISKLSPEQISAVACIGHGKGLYLLDNKLEPLEQGILSTDNRAKDLAQYFESKLDNIWELTRQHIFPSQSPVILRWLKDYQPETYKSIGAVLSAKDFIRYKLTGKVQQEYGDASGNHWINFQTGTYDPAILDFFGIREIENSLPELIDSADLVPGGISSQAAKETGLVEGTPVVGGLFDIDACALGSGVLESDTFSVISGTWNINTYPSLKP-AK--QDSGLMTSYFPDRRYLLEASSPTSAGNLNFMLKMLMHQEIDNAKSSGGSIYDNLEEFLTHTDATHHGLIFFPFLYGSNTSQDASACFFGLTTKSTKSQMIRAVYEGIAFAHKQHITDLIKSRGSVPKIIRFSGGATNSPAWMQMFSDILNFPIETVE-GTELGGLGGAILARHALDKI-SLKEAVQDMVRVKAIYKPQLSEVKGYKKKYHAYQKLLETLDPIWSELGHLNK |
| 2ITM Chain:A ((1-483)) | --MYIGIDLGTSGVKVILLNEQGE-VVAAQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALG-DQH-SLQDVKALGIAGQMHGATLLDAQQRVLRPAILWNDGRCAQECTLLEARVPQSRVITGNLMMPGFTAPKLLWVQRHEPEIFRQIDKVLLPKDYLRLRMTGEFASDMSDAAGTMWLDVAKRDWSDVMLQACDLSR--DQMPALYEGSEIT-GALLPEVAKAWGMA-TVPVVAGGGDNAAGAVGVGMVDANQAMLSLGTSGVYFAVSEGFLSKPESAVHSFCH-ALPQRWHLMSVMLSAASCLDWAAKLT---GLS--------NVPALIAAAQQADESAEPVWFLPYLS-----PQAKGVFFGLTHQHGPNELARAVLEGVGYALADGMDVVHAC-GIKPQSVTLIGGGARSEYWRQMLADISGQQLDYRTGGDVGPALGAARLAQIAANPEKSLIELLPQLP-LEQSHLPDAQRYAAYQPRRETFRRLYQQLLPLMA------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ITM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -244145 for 4377 contacts (-55.8/contact) +
2D Compatibility (PS) -49635 + (NN) -12908 + (LL) 1276
1D Compatibility (HY) -20000 + (ID) 5450
Total energy: -330862.0 ( -75.59 by residue)
QMean score : 0.495
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