Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDIENYCQDYCLETIFPKHYFKDLQVITLTAGQSVCKQGEQLEYLHYIVKGRFKIVRRLFNGKEHILDIKTKPTLIGDIELLTNRQIVSSVIALEDLTVIQLSLKGRKEKLLTDATFLLKLSQELAQAFHDQNIKASTNLGYTVKELLASHILAIEEQ-------GY--FQLELSSLADSFGVSYRHLLRVIHDMVKEGLIQKEKPKYFIKNRFALESLNIQP
2GAU Chain:A ((20-231))
----------LLNEEERELLDKEIQPFPCKKASTVFSEGDIPNNLFYLYEGKIKILR-----RFHISRIVKPGQFFGMRPYFAEETCSSTAIAVENSKVLAIPVEAIEALLKGNTSFCRYFLKALAKELGYAERRTVTLTQKHVRGRLAETLLILKENFGFENDGATLSIYLSREELATLSNMTVSNAIRTLSTFVSERMLALDGKRIKIIDCDRLQKTARSG
General information:
TITO was launched using:
RESULT:
Template:
2GAU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101831 for 1443 contacts (-70.6/contact) +
2D Compatibility (PS) -21736 + (NN) -9483 + (LL) 800
1D Compatibility (HY) -10800 + (ID) 1900
Total energy: -144950.0 ( -100.45 by residue)
QMean score : 0.400
(partial model without unconserved sides chains):
PDB file :
Tito_2GAU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GAU-query.scw
PDB file :
Tito_Scwrl_2GAU.pdb
: