Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIMGLDVGSKTVGVAISDPLGFTAQGLEIIKIDEESGNFGFDRLAELVKEYKVDKFVVGLPKNMNNTSGPRVEASQAYGDKITELFNLPVEYQDERLTTVQAERMLVEQADISRGKRKKVIDKLAAQLILQNYLDRMF
1IV0 Chain:A ((1-98))
MRVGALDVGEARIGLAVGEEGVPLASGRGYLVRKT--LEEDVEALLDFVRREGLGKLVVGLPLRTDLKESAQAGKVLPLVEALRA-RGVEVELWDERFTTK--------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1IV0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40789 for 618 contacts (-66.0/contact) +
2D Compatibility (PS) -10572 + (NN) -4227 + (LL) 4180
1D Compatibility (HY) -5200 + (ID) 1250
Total energy: -57858.0 ( -93.62 by residue)
QMean score : 0.491
(partial model without unconserved sides chains):
PDB file :
Tito_1IV0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IV0-query.scw
PDB file :
Tito_Scwrl_1IV0.pdb
: