Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNKVQERRERKIKEAIKAKNWDEVTRLLQQEQSNAERRDRYHNRRIKDETIASKNAKKSVRYDVIASSDLNPEEALILEELRQAIREAK-ASLSEIDSKIVEMIAEQGSSYKETARYITEHYKKMSDVTVKSHYCKALKKLAPLLKAYR
3MZY Chain:A ((137-199))
--------------------------------------------------------------------------------EEIEEFKKFSENNFSKFEKEVLT-YLIRGYSYRE----IA-TILSKNLKSIDNTIQRIRKKSEEWIKEEE
General information:
TITO was launched using:
RESULT:
Template:
3MZY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8020 for 382 contacts (-21.0/contact) +
2D Compatibility (PS) -6684 + (NN) -3389 + (LL) 7204
1D Compatibility (HY) -2400 + (ID) 500
Total energy: -13789.0 ( -36.10 by residue)
QMean score : 0.509
(partial model without unconserved sides chains):
PDB file :
Tito_3MZY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MZY-query.scw
PDB file :
Tito_Scwrl_3MZY.pdb
: