Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRNRKLGIDYSSDDFEGCPVETTLDIIGGKWKGILLYHLIDGKKRFNEFRKLYPKITQRMLTLQLRELERDGVIHREVYKQVPPKVEYSLTEFGRTLEPVILHMKDWGEKYKDRIDKLEAARKAEDKI
4A5M Chain:E ((14-109))-----------------CPVEFTLDVIGGKWKGILFYHMIDGKKRFNEFRRICPSITQRMLTLQLRELEADGIVHREVYHQVPPKVEYSLTEFGRTLEPIVLQMKEWGESNRD---------------


General information:
TITO was launched using:
RESULT:

Template: 4A5M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 290 -49474 -170.60 -515.35
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain E : 0.88

3D Compatibility (PKB) : -170.60
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.88
QMean score : 0.441

(partial model without unconserved sides chains):
PDB file : Tito_4A5M.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4A5M-query.scw
PDB file : Tito_Scwrl_4A5M.pdb: