Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMENIIEINYNQTGKSKKTNEYGMREMQARAFEKRNSQYLLVKAPPASGKSRALMFIGLDKLINQGLRKVIVAVPERSIGSSFKNTDLKSYGFFENWKVDPRNNLTVGGDNSKVKSFVRFMESDDQVLICTHSTLRFAF-EKIDDKAFDNCLLAIDEFHHVSADVNSRLGELLRSIIHNSSAHIVAMTGSYFRGDSVPI----LLPEDEELFDKVTYSYYEQLDGYEYLKGFGIGYHFYQGQYTSAINEVLDTNKKTIVHIPNVNSGESTKDKYDEVGKILDMIGEVEYQDDDTGIIYVKRHSDGKTLKIADLVDDQVGRENVVAYLRNIEALDDLDIIIALGMAKEGFDWPFCEHTLTVGYRGSLTEIVQIIGRCTRDSYNKTYAQFTNLIAMPDAKDEVVTYTVNTMLKAISASLLMEQVLTPDFKFKRRRNESEKSSTTGELFVKGLKEPSTENVKKIIENDINDLKAKIMQDSQVQKTFSGEVDPKVLNKVLIPKVIQKVYPNLSDEEIEEVRQHVVLDTVMKGAKSEVVGSKEFIRMADKFINIEDLDINLIDSINPFQKAFEVLSKELNSPVLKLIQ--ETIDAKRINFDEDELVFIWPKV
2BMF Chain:A ((169-618))MASIEDNP----------------EIEDDIFRKK--RLTIMDLHPGAGKTKRYLPAIVREAIKRGLRTLILA-PTRVVAAEMEEA-LRGLP-------------------------IRYQTGREIVDLMCHATFTMRLLSPIRVPNYN--LIIMDEAHFTDPASIAARGYISTRVEMGEAAGIFMTATPPGSRDPFPQSNAPIMDEEREIPER------SWNSGHEWVTDF---------------------KGKTVWFVPSIKAGNDIAACLRKNGKKV----------------------------------IQLSRKTFDSEYIKTRT-NDWDFVVTTDISEMGANFKA---ERVIDPRRCMKPVIL------------------------TDGEERVILAGPMPVTHSSAAQRRGRVG------RNPKNENDQYIYMGEPLENDEDCAHWKEAKMLLDN-INTPEGIIPSMFEPEREKVDAIDGEYRLRGEARKTFVDLMRR------GDLPVWLAYRVAAEG-----------INYADRRWCFDGVKNN---QILEENVEVEIWTKEGERKKLKPRWLDARIYSDPLALKEFKEFAAGRK-


General information:
TITO was launched using:
RESULT:

Template: 2BMF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2256 -118522 -52.54 -272.46
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -52.54
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.236

(partial model without unconserved sides chains):
PDB file : Tito_2BMF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2BMF-query.scw
PDB file : Tito_Scwrl_2BMF.pdb: