Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMANIKDIAEKAGVSVTTVSRVINNHPYVSEDKRKRVFEAMESLEYTRNIHAVHLSKGFSNMIGVVLPTVNLPYFAELIAGIADAAAESGVHLSLFQTNYEVQKEIFALSQLKQRQVDGLIFCSKALADEK----LMEWEGPILLCQNSDNAR-FPTISIPHQEAFRNGLDYLIAKGHKKIAICLARKKGMNSHFRIKAYKEALEEIGEAFREDWVIEKAITINDGKALFHKWNTWKEKPTAIFVANDQVSAGLFLEAKNQRVSVPDELAILSVDNHEISQAL--GITTIDIQTREMGKQAFAILEKRIQGQPIERK--VLDYRLIERSTV
2O20 Chain:E ((62-328))---------------------------------------------------------RTTTVGVILPTITSTYFAAITRGVDDIASMYKYNMILANSDNDVEKEEKVLETFLSKQVDGIVYMGSSL-DEKIRTSLKNSRTPVVLVGTIDGDKEIPSVNIDYHLAAYQSTKKLIDSGNKKIAYIMGSLKDVENTERMVGYQEALLEANIEFDENLVFEGNYSYEQGKALAERL--LERGATSAVVSHDTVAVGLLSAMMDKGVKVPEDFEIISGANSPITQYTYPTLTSVNQPLYDLGAVAMRLLTKLMLKEDVEQNQLVLDHEIFSR---


General information:
TITO was launched using:
RESULT:

Template: 2O20.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 1385 -173531 -125.29 -672.60
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain E : 0.73

3D Compatibility (PKB) : -125.29
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.592

(partial model without unconserved sides chains):
PDB file : Tito_2O20.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2O20-query.scw
PDB file : Tito_Scwrl_2O20.pdb: